SRR3128559.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128559.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2290979
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16278	0.7105259367283593	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	13580	0.5927596891983733	No Hit
GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	4225	0.18441897546856606	No Hit
CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	4177	0.18232380130939657	No Hit
CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC	4077	0.17795885514446008	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	3657	0.1596260812517269	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCAAT	3066	0.13382924941695232	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCAATGACAG	2988	0.13042459140830187	No Hit
AGGGACCTGTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTA	2431	0.1061118412696057	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2399	0.10471505849682602	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCTACG	2305	84.61406	3
TAGGGCG	395	84.47653	4
CGTTTTT	6600	84.13012	1
GCTACGA	2320	84.068825	4
TCCGCTA	2390	82.81895	1
CGTAGGG	545	82.7828	2
CTACGAC	2375	82.31985	5
AGGGATG	7125	82.25389	5
CGAAGGG	2005	82.03876	2
ACGACCA	2335	81.915	7
ACGGGTA	345	81.73481	4
CTAGCGG	210	80.59883	1
CGAGGGA	1610	79.9816	3
CGACCAA	2435	78.550934	8
TAGCGGG	1070	77.741844	2
AAGGGAT	6650	77.033516	4
GGATGGC	4890	76.88419	7
AGGGATC	2425	76.74645	5
AGGGCAT	2715	76.68471	5
AGCGGGA	2150	76.5059	3