SRR3128558.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128558.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2577723
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19901	0.7720379575307355	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	15664	0.607668085360607	No Hit
CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	4724	0.18326251501809931	No Hit
CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC	4632	0.17969347365872904	No Hit
GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	4600	0.1784520679685133	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	4193	0.16266293934608178	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCAAT	3214	0.12468368401104385	No Hit
AGGGACCTGTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTA	2677	0.10385134477211089	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7580	85.4035	1
AGGGATG	8100	84.88659	5
CGTAGGG	635	84.38262	2
TAGGGCG	480	84.20483	4
CGCTACG	2680	83.6495	3
TAGCGGG	1080	83.12497	2
TCCGCTA	2750	82.11737	1
GCTACGA	2735	81.795494	4
GCGGGAT	1705	81.59191	4
CTACGAC	2770	80.93164	5
ACGACCA	2755	79.32519	7
ATAGCGG	405	78.9915	1
GTAGGGC	1595	78.37917	3
AAGGGAT	7470	78.20424	4
CGACCAA	2815	77.80138	8
TAGGGCA	2085	77.31572	4
GGATGGC	5650	77.19324	7
CGAAGGG	2335	76.69374	2
CGAGGGA	1945	76.35672	3
AGGGATC	2815	76.298775	5