SRR3128547.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128547.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1254195
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11585	0.9237000625899482	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGATACGT	3919	0.3124713461622794	No Hit
GCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	3863	0.3080063307539896	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	3509	0.2797810547801578	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	3316	0.2643926981051591	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3268	0.2605655420409107	No Hit
GGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAA	1936	0.1543619612580181	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1513	0.12063514844182922	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1265	0.10086150877654593	No Hit
AGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCT	1257	0.10022364943250452	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4215	0.0	81.6483	1
GACCGAT	105	0.0	80.56128	8
TACGGGT	35	3.868263E-8	80.56128	3
AGGGATG	2350	0.0	80.189896	5
TAGGGCA	615	0.0	77.9414	4
AGGGAAT	1800	0.0	77.27915	5
CGTAGGG	250	0.0	77.07028	2
ATAACGG	70	0.0	73.88023	1
CGAAGGG	1140	0.0	73.78895	2
CGCTACG	655	0.0	73.181625	3
CTACGAC	645	0.0	72.85904	5
AATGCGG	370	0.0	72.42805	1
GAGGGAT	1955	0.0	72.11368	4
AAGGGAT	2360	0.0	71.486755	4
CCGTACA	1625	0.0	71.431	3
GGTAAGG	725	0.0	71.33265	1
GGATGGC	1610	0.0	70.63706	7
GTAGGGA	1265	0.0	70.58399	3
TAAGGGA	1240	0.0	70.49112	3
ATGCGGG	715	0.0	70.326805	2