SRR3128546.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128546.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1401872
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14765	1.0532345321113483	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	4241	0.30252405355125145	No Hit
GCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	4235	0.30209605441866305	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3849	0.2745614435554744	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	3733	0.26628679365876484	No Hit
GGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAA	2497	0.17811897234554938	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGATACGT	1936	0.13810105344853166	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1676	0.11955442436969994	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5145	83.12312	1
TAGACGG	165	82.69084	1
CTACGAC	800	79.30895	5
AGGGAAT	2210	77.408295	5
AGGGATG	2810	76.93606	5
TAAGGGA	1270	74.75256	3
CGAAGGG	1345	73.39271	2
TCCGCTA	895	72.54365	1
CGCTACG	895	71.94091	3
TACGACC	905	71.14598	6
TAGGGCA	710	70.82781	4
GGATGGC	1840	70.241425	7
GAGGGAT	2055	70.21097	4
TAGGGCG	235	69.996864	4
ATAGGGC	810	69.62651	3
ACGACCA	925	69.6077	7
TAGGGTC	400	69.3219	4
AGTAGGG	2255	68.99812	2
GTAAGGG	1875	68.94254	2
GCTACGA	925	68.59152	4