SRR3128518.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128518.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1976368
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	55588	2.8126340843405684	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTT	5091	0.2575937274839504	No Hit
CGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCT	4883	0.24706937169595944	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCT	4782	0.24195898739506005	No Hit
CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG	3891	0.19687629024554132	No Hit
CGTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC	2347	0.118753187665455	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTC	2346	0.11870258980108968	No Hit
CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	2313	0.11703286027703343	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	17380	87.907524	1
TAGGGCA	900	74.67446	4
ATAGGGC	1220	73.96393	3
GTAGGGC	905	72.70395	3
AGGGATG	2880	70.49687	5
ATAAGGG	2350	70.24131	2
AGTAGGG	2930	69.97972	2
TAGAGGG	3440	69.17441	2
ACGGGTA	150	68.930275	4
GGTAAGG	1240	68.32476	1
AGGGAAT	2115	67.99698	5
CGTAGGG	550	67.54882	2
AGAGGGC	2965	67.0493	3
AGGGCAT	1735	66.90769	5
TAGGGTA	565	66.545715	4
ATAGCGG	425	66.44918	1
ATAGGGA	1620	66.43532	3
GAATAGG	1220	66.358406	1
AAGGGCA	2805	66.34999	4
GATAGGG	2720	65.8733	2