SRR3128517.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128517.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1934931
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	52837	2.7306916887475574	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTT	5548	0.2867285706828822	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCT	5386	0.2783561791092292	No Hit
CGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCT	5337	0.27582378906534655	No Hit
CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG	4530	0.23411687548548243	No Hit
CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	2599	0.13432003518471716	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTC	2574	0.13302799944804233	No Hit
CGTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC	2551	0.13183932657030148	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	16800	88.393135	1
GTAGGGC	755	75.939964	3
ATAGCGG	425	71.91843	1
ATAGGGC	1100	71.775154	3
AGGGTAC	705	67.998955	5
AGAGGGC	2800	67.80798	3
AGTAGGG	2765	67.47655	2
AGGGCTC	1885	67.319916	5
TAGGGCA	965	66.72091	4
CGTAGGG	530	66.50326	2
TATAGGG	1435	66.48163	2
ATGAGGG	2795	66.07973	2
AGGGATG	2785	65.98463	5
AAGGGCA	2625	65.16897	4
GTAGGGT	615	64.953316	3
TAGAGGG	3140	64.506744	2
CCGTACA	350	64.45115	3
GGTAAGG	1045	64.34806	1
AGGGCAT	1510	64.11822	5
AAGAGGG	6220	63.99566	2