SRR3128506.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128506.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1155871
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12595	1.0896544683619538	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6847	0.5923671413159427	No Hit
CCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG	3468	0.3000334812448794	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTCGGGTGA	3266	0.28255748262565633	No Hit
GCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG	3125	0.27035888953006	No Hit
CTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC	3015	0.2608422566186019	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1569	0.13574179125525254	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1502	0.12994529666372803	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATG	1456	0.12596561380984556	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCTCG	1314	0.11368050586959963	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTT	1241	0.10736492221017743	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4425	86.54487	1
TAGGGCA	715	84.78987	4
CGCTACG	1200	80.67635	3
GCTACGA	1210	80.398	4
AGGGATG	2905	79.5938	5
AGGGCGA	455	79.53158	5
ACGACCA	1215	78.51996	7
AGGGCAT	1090	78.470276	5
GGTAAGG	655	78.29164	1
AGGGTAC	535	78.18015	5
AAGGGCG	535	78.18015	4
GAGGGAT	1980	77.85185	4
CGTAGGG	310	77.32927	2
AGGGAAT	2185	77.000206	5
CGGGAAT	385	76.902435	5
GGATGGC	2095	75.59728	7
GAATGCC	1480	75.257	8
TCCGCTA	1295	74.83894	1
GTAGGGC	535	74.666435	3
GGAATGC	1600	74.60605	7