SRR3128504.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128504.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1259827
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14665	1.1640487146251033	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	7540	0.5984948727087133	No Hit
CCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG	4220	0.3349666263701286	No Hit
GCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG	4192	0.3327440989913695	No Hit
CTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC	3437	0.2728152357426853	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTCGGGTGA	2510	0.199233704310195	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1783	0.14152736844026997	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCTCG	1485	0.11787332705204762	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTT	1454	0.11541267173984998	No Hit
CGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCT	1347	0.10691944211387754	No Hit
AGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCT	1335	0.10596693038012361	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4800	85.98994	1
ATTGCGG	170	80.28573	1
TAGGGCA	580	79.408394	4
AGGGATG	2985	79.0365	5
AGGGAAT	2465	78.550446	5
CGCTACG	1365	78.50016	3
GGAATGC	1695	78.466644	7
GTAGGGC	520	77.72549	3
GCTACGA	1395	76.47509	4
AAGGGCG	625	75.94684	4
CGGGATG	695	75.735855	5
GAATGCC	1680	75.25084	8
ACGACCA	1375	75.194885	7
GGATGGC	2095	74.70136	7
GGTAAGG	690	74.34756	1
CGTAGGG	330	74.06733	2
GATGACC	1700	73.81263	8
TATAGGG	930	73.79165	2
TAGCGGG	600	73.64002	2
AATGCCC	1720	73.227585	9