SRR3128494.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128494.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1823830
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15805	0.8665829600346524	No Hit
CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	4635	0.2541355279823229	No Hit
GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	4200	0.23028462082540588	No Hit
CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	4142	0.22710449987115028	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3879	0.21268429623374988	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCACTTTGCG	3820	0.20944934560786915	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2291	0.1256147776930964	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2209	0.12111874461983847	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5800	83.20399	1
CGCTACG	825	75.766464	3
CGTAGGG	360	75.73976	2
CTACGAC	835	75.421936	5
AGGGATG	3005	75.38448	5
GCTACGA	860	73.22944	4
AGGGAAT	2505	72.7953	5
CGAAGGG	1820	71.032936	2
TAGCGGG	830	70.79953	2
GAGGGAT	2870	70.74263	4
ACGACCA	875	70.36272	7
AGGGATC	1680	70.21725	5
AGTAGGG	2725	69.69688	2
AGGGTAC	930	69.23361	5
ACGGGAT	790	69.00972	4
GTACGGG	280	68.83737	2
AGAGGGC	2260	68.83335	3
ATAGCGG	305	67.85434	1
TAGGGCG	305	67.8004	4
TAAGCGG	515	67.58484	1