SRR3128493.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128493.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1743275
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14742	0.8456497110323958	No Hit
CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	5108	0.2930117164532274	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCACTTTGCG	4982	0.28578394114525824	No Hit
GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	4817	0.27631899728958426	No Hit
CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	4724	0.27098421075274987	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3706	0.21258837532804634	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2648	0.1518980080595431	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2051	0.11765212029083191	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5305	84.82801	1
AGGGATG	2920	75.166176	5
AGGGAAT	2405	75.04203	5
ATAGCGG	245	74.853355	1
TAAGGGA	1760	73.69661	3
CGTAGGG	370	73.66774	2
CTACGAC	745	73.17963	5
GTAGGGC	600	72.842155	3
GTAGGGA	1420	71.154305	3
ACGGGAT	670	70.845146	4
GGTAAGG	960	70.53489	1
CCGTACA	2105	69.655205	3
ATAGGGA	1815	69.650894	3
TCCGCTA	800	69.359314	1
AAGGGAT	3440	69.12826	4
TAGCGGG	810	69.04194	2
ATAACGG	150	68.967445	1
AGTAGGG	2530	68.727776	2
CGGGTAT	130	68.69082	5
TCCGTAC	2250	68.29931	2