SRR3128492.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128492.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1953433
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17870	0.914799739740242	No Hit
CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	5474	0.2802246096999487	No Hit
GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	5443	0.27863765995557566	No Hit
CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	5383	0.2755661443213051	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4307	0.22048363061338677	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCACTTTGCG	2545	0.13028345482030865	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2328	0.11917480660969687	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6705	83.428665	1
CGGGTAT	215	78.69577	5
TACGGGT	175	77.88382	3
AGGGATG	3470	76.390076	5
ATAGCGG	290	74.62633	1
TCCGCTA	995	73.28934	1
TAAGGGA	1960	72.896194	3
CTACGAC	1015	72.69775	5
TAGGGCG	370	72.40365	4
AGGGAAT	2810	71.75271	5
AGGGTAC	935	71.37795	5
ACGGGTA	265	70.94168	4
ATAGGGA	2220	70.49829	3
AAGGGAT	3975	70.232254	4
GAGGGAT	3035	69.37558	4
ACGGGAT	775	69.13381	4
ACGACCA	1055	69.05046	7
TAGCGGG	900	68.94225	2
TAAGCGG	635	68.90353	1
GTAGGGA	1890	68.633255	3