SRR3128491.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128491.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2211382
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	51355	2.322303428353853	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTT	5551	0.2510194982142389	No Hit
CGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT	5283	0.2389003799434019	No Hit
CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTG	4878	0.22058604076545799	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCT	4648	0.21018530493600837	No Hit
CTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC	3836	0.17346618539899483	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2669	0.12069375621217864	No Hit
CGTCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC	2527	0.11427243235225754	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	16050	88.3229	1
GAATAGG	1290	74.06274	1
AGGGATG	3470	72.99519	5
TAGGGCA	1120	70.90938	4
ATAGGGC	1260	70.48979	3
CGTAGGG	590	70.1185	2
AGTAGGG	3065	69.17481	2
GTAGGGC	1070	68.07426	3
TAGGGTA	625	67.670204	4
TAGGGAT	1395	67.37375	4
TAGAGGG	3780	67.15894	2
ACGGGTA	225	66.83476	4
AGTAAGG	1495	66.74028	1
AACGAGG	850	66.44399	1
ATAGAGG	1425	66.055435	1
GTAGGGT	655	66.00571	3
GAGGGAT	2610	65.898506	4
ATAGGGA	1935	65.81476	3
CGTACAC	595	64.763725	4
CCGTACA	610	64.71194	3