SRR3128490.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128490.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2132608
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	47766	2.2397927795450454	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTT	5948	0.2789073284916872	No Hit
CGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT	5735	0.26891955764960085	No Hit
CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTG	5226	0.24505206770301904	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCT	4924	0.23089100294099996	No Hit
CTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC	4299	0.2015841636156293	No Hit
CGTCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC	2756	0.1292314386891543	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2395	0.11230380829482024	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTC	2269	0.10639554948682552	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	15000	87.74213	1
ATAGGGC	1325	73.41695	3
AGGGATG	3150	71.91156	5
ATAGGGA	1545	71.175285	3
TAGGGCA	1020	70.490906	4
AGATAGG	1200	70.1404	1
AGTAGGG	2935	69.33007	2
TAGGGAT	1130	68.20359	4
GTAGGGC	1095	67.80861	3
GATAGGG	2870	66.80672	2
GAATAGG	1210	65.67466	1
ATAAGGG	2485	65.053986	2
TAGAGGG	3560	64.94668	2
GAGGGAT	2480	64.80616	4
TATAGGG	1560	64.76729	2
TCCGTAC	690	64.7018	2
CCGTACA	685	64.48803	3
GTAGGGT	620	64.42718	3
AAGGGAT	3085	63.978783	4
AATAGGG	2880	63.963974	2