SRR3128451.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128451.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1893651
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	44798	2.365694629052555	No Hit
CGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCT	5211	0.27518270262049344	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTT	4833	0.25522126305216747	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCT	4486	0.236896872760609	No Hit
CCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	4116	0.21735789752177145	No Hit
CTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC	2945	0.15551968129290983	No Hit
CGTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTC	2061	0.10883737288444387	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTC	2037	0.10756997989597873	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	14920	88.55833	1
GACCGAT	75	75.19387	8
AGGGATG	2985	73.52694	5
ACGGGTA	180	73.107086	4
GTAGGGC	835	72.04204	3
GGTAAGG	1110	70.3197	1
AGTAGGG	2945	69.73625	2
ATAGGGA	1795	69.38154	3
ATAGCGG	380	69.294106	1
ATAGGGC	1025	69.23339	3
ACGGGAT	815	68.62199	4
TAAGGGA	1675	68.17952	3
GAGGGAT	2360	68.10642	4
CGTAGGG	490	68.09649	2
TAGGGAT	1300	67.603966	4
GAATAGG	1070	67.23564	1
TAAGCGG	445	66.56906	1
TATAGGG	1420	66.19179	2
AGAGGGA	4135	66.14697	3
TAGAGGG	3385	65.808525	2