SRR3128450.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128450.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2127233
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54272	2.5512955092366467	No Hit
CGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCT	5534	0.2601501575050782	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTT	5333	0.25070126309623814	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCT	5046	0.23720955814431235	No Hit
CCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	4795	0.2254101924894922	No Hit
CTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC	3352	0.15757559233050633	No Hit
CGTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTC	2411	0.11333972348116074	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTC	2303	0.1082627055898437	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2137	0.10045914105318976	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	17690	88.92059	1
ACGGGTA	255	71.87823	4
AGGGATG	3835	71.81334	5
TAAGGGA	2045	71.01303	3
ATAGCGG	485	69.85292	1
GTAGGGC	830	69.6466	3
TAGAGGG	3940	68.71801	2
AGGGCAT	1520	68.640785	5
AGTAGGG	3105	68.57739	2
ATAGGGA	2225	68.436516	3
AAGGGAT	4030	68.3385	4
AGAGGGA	4925	67.75246	3
GAGGGAT	3100	67.312256	4
TAGGGCA	945	67.139	4
GATAGGG	2940	66.990166	2
AGAGGGC	3000	66.42285	3
ACGGGAT	830	66.2492	4
GAGGGTA	1065	66.193375	4
ATAAGGG	2945	65.91878	2
AGGGAAT	2705	65.500854	5