SRR3128415.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128415.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7656010
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	266881	3.4859019254154577	No Hit
CGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCT	21795	0.2846783115487049	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTT	19341	0.25262506187949074	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCT	18950	0.24751796301206502	No Hit
CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	16810	0.21956606639750992	No Hit
CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC	11195	0.14622499186913288	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	10005	0.1306816474900111	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTC	9989	0.13047266134709856	No Hit
CGTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTC	9319	0.12172136661263505	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	8742	0.1141848038338508	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	84810	89.43902	1
ATAGGGC	3420	72.281944	3
ATAGAGG	5110	69.20487	1
AGATAGG	3645	68.378265	1
TAGTAGG	2800	68.35592	1
GGTAAGG	4220	68.31055	1
GTTTTTT	113045	67.48245	2
GGATAGG	3750	67.21609	1
AGTAGGG	11805	67.20114	2
ATAGGGA	3520	66.890625	3
TATAGGG	5050	65.60968	2
AAGGGGC	27270	65.57393	4
GAATAGG	4115	65.48239	1
AGTAAGG	4210	65.233475	1
GATAGGG	10030	64.849304	2
TAGGGCA	2325	64.68278	4
ATAAGGG	8875	63.386383	2
AATAGGG	9835	62.885674	2
AGGGGCT	32770	62.513256	5
GTAAAGG	5120	62.181107	1