SRR3128414.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128414.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11143323
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	402945	3.616021899392129	No Hit
CGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCT	23215	0.2083310337499864	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTT	18383	0.16496874406314885	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCT	18039	0.16188169363842367	No Hit
CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	17224	0.15456789684728695	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	16419	0.1473438398940783	No Hit
CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC	11618	0.10425974370481766	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	11471	0.10294056808727522	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	127750	89.11213	1
ATAGGGC	4690	69.14204	3
AGATAGG	5725	67.97324	1
AGTAGGG	16920	67.88781	2
TAGTAGG	3930	67.40993	1
GGATAGG	5900	67.15341	1
GTTTTTT	171780	67.08167	2
ATAGAGG	7590	66.83208	1
GGTAAGG	6310	66.51866	1
GAATAGG	5960	66.47737	1
AAGGGGC	41015	66.16069	4
TAGGGCA	3645	66.14329	4
AATAGGG	13965	65.41849	2
ATAGGGA	5870	65.01055	3
TAGAGGG	21440	64.80393	2
GATAGGG	15630	64.165344	2
GTATAGG	3725	63.66669	1
AGGGGCT	48400	63.49389	5
AGTAAGG	6685	63.209587	1
TATAGGG	8140	63.19192	2