SRR3128411.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128411.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7053720
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	256463	3.6358545561774496	No Hit
CGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCT	25670	0.3639214485406282	No Hit
CGTTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTT	20530	0.29105209733303844	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCT	19484	0.2762230425931282	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	11567	0.16398439405023163	No Hit
CCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTG	11080	0.15708023567706117	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	9677	0.1371900217190362	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTC	9542	0.13527613798109367	No Hit
CGTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC	8405	0.11915698383264434	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	77445	89.76789	1
GGTAAGG	4000	72.06963	1
ATAGGGC	3415	70.73657	3
AGATAGG	3585	70.311676	1
GGATAGG	3510	69.00045	1
GTTTTTT	101935	68.6283	2
AGTAAGG	3985	67.73847	1
ATAGAGG	4330	67.22868	1
TAGGGCA	2265	67.22772	4
ATAGGGA	3305	66.97628	3
TAGTAGG	2275	66.7687	1
GAATAGG	3830	66.55066	1
AGTAGGG	10415	66.24369	2
AATAGGG	8455	66.14715	2
AAGGGGC	25150	66.02026	4
TATAGGG	4680	65.977715	2
GATAGGG	9330	65.23277	2
ATAAGGG	8250	64.828514	2
AGGGACT	9890	64.67363	5
GTATAGG	2200	63.914635	1