SRR3128402.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128402.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2131967
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24138	1.1321938848021569	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTACAACGT	4514	0.21172935603599868	No Hit
CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	4240	0.19887737474360534	No Hit
CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	4189	0.19648521764173646	No Hit
GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTG	4102	0.19240447905619554	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2936	0.13771320100170406	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2766	0.1297393439954746	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2729	0.12800385747058937	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8105	85.17768	1
AGTACGG	285	75.955925	1
TAGGGCA	985	74.43139	4
TAGGGTA	655	73.90327	4
CCGTACA	1990	73.44717	3
TCCGTAC	2125	71.656204	2
GTACGGG	455	71.26978	2
ATCCGTA	2185	70.64332	1
ATAGGGC	1245	70.58948	3
AGGGATG	2930	70.41492	5
CGTACAC	2095	69.766045	4
AGTAGGG	3640	69.59133	2
AGGGTAC	785	69.44741	5
ATAGGGA	2000	69.32019	3
GTAGGGT	800	69.32019	3
CGTAGGG	580	68.874535	2
ATAACGG	205	68.86778	1
AGAGGGC	2800	68.81665	3
GAATAGG	1230	67.71998	1
ACGGGAT	640	67.557816	4