SRR3128384.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128384.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2552287
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34436	1.3492213062245744	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	6489	0.254242567548242	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	6428	0.25185255419942976	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGCTTAACA	6250	0.24487841688650216	No Hit
GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	6162	0.2414305287767402	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	4553	0.17838902913347912	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3555	0.13928684352504245	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2741	0.10739387850974441	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	10075	84.48994	1
ATAGCGG	360	78.42603	1
CGTAGGG	630	77.58172	2
AGGGTAC	1290	75.77602	5
ATAGGGC	1390	75.73556	3
CCGTACA	2965	74.97268	3
TAGGGCA	1195	74.72119	4
TCCGTAC	3130	74.62403	2
ACGGGTA	275	73.48419	4
ATCCGTA	3210	73.148766	1
TAGGGTA	945	72.60711	4
TAGGGCG	340	71.87578	4
AGGGCAT	2275	71.2682	5
CGTACAC	3100	71.099945	4
GAATAGG	1200	70.97556	1
ATAGGGA	1900	70.494934	3
AGTAAGG	1410	70.416565	1
AGTAGGG	3880	70.25268	2
AAGGGTA	1900	69.75151	4
GTAGGGT	1220	69.724495	3