SRR3128383.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128383.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2835997
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42070	1.4834289316949207	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	7555	0.2663966146649661	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	7188	0.2534558393397454	No Hit
GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	6889	0.24291280985135033	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4103	0.1446757524778764	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGCTTAACA	3517	0.12401282511934955	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3119	0.10997895978028187	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3075	0.10842747717998293	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	12525	86.765434	1
AGGGTAC	1570	77.836586	5
ACGGGTA	315	77.589485	4
TAGGGCA	1340	75.06181	4
ATAGGGA	2375	73.61892	3
AAGGGTA	2055	73.41813	4
GAATAGG	1480	72.12547	1
AGTAAGG	1840	72.07022	1
TAAGGGA	2375	72.03571	3
CGTAGGG	640	71.97077	2
AGTAGGG	4370	71.73886	2
TAGGGTA	1095	71.25314	4
ATAGCGG	495	71.249306	1
GGTAAGG	1555	69.85639	1
AGGGTAA	1690	69.8067	5
AGGGCAT	2550	69.48823	5
AGAGGGC	3940	69.30906	3
AGGGATG	3455	69.24362	5
CGGGTAT	320	69.033195	5
AAGAGGG	9605	68.21431	2