SRR3128381.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128381.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2638663
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33142	1.2560148832950626	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGGAATAT	8249	0.3126204445205773	No Hit
CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	7076	0.2681661129140023	No Hit
CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC	6671	0.2528174306457475	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	5997	0.22727419151289877	No Hit
GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	5944	0.2252655985247074	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	5119	0.19399976427455873	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	3066	0.11619520946782518	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	10605	85.133675	1
CGTAGGG	660	77.61436	2
CCGTACA	3850	76.78023	3
CGTACAC	3840	76.368256	4
TCCGTAC	4040	75.96111	2
TAGGGTA	850	75.746254	4
ACGGGTA	330	75.47818	4
ATCCGTA	4105	75.29901	1
GTAGGGT	990	75.00348	3
ATAGGGA	2280	73.58561	3
AGGGTAC	1540	73.24029	5
ATAGCGG	490	72.971725	1
AGGGCAT	2275	72.92103	5
GTAGGGA	1685	72.236946	3
GAATAGG	1420	72.22794	1
AGGGATG	3825	71.38455	5
TAGGGCA	1495	71.04389	4
AGTAGGG	3975	70.93714	2
GTACGGG	600	70.493774	2
GTAGGGC	1290	69.58301	3