SRR3128375.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128375.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2628770
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35650	1.3561475518968948	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCAGCAAGA	7887	0.3000262480171335	No Hit
CTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC	7606	0.2893368381410317	Illumina Single End Adapter 1 (95% over 21bp)
CCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG	6743	0.25650779642190075	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	5719	0.21755421737162245	No Hit
GCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG	5569	0.21184812669042935	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4279	0.16277574683216867	No Hit
CGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCT	3464	0.13177265413101946	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2801	0.10655173332014592	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	12810	87.70705	1
AGGGTAC	1285	80.82595	5
CCGTACA	3585	75.77053	3
TCCGTAC	3690	75.27015	2
CGTACAC	3645	74.26541	4
GAGGGTA	1515	73.20841	4
AGGGATG	3695	72.370155	5
CGAAGGG	2550	71.69206	2
TAGGGCA	1305	71.66452	4
AGGGCAT	2290	71.62285	5
ATCCGTA	3890	71.60138	1
GTAGGGT	965	71.10288	3
TAAGGGT	1015	70.37837	3
GTAGGGA	1885	70.057816	3
ATAGGGA	2415	69.27787	3
AGTAGGG	4150	68.96533	2
ATGCGGG	1045	68.80766	2
TAGGGTA	895	68.78756	4
AGAGGGC	3620	68.54677	3
AGGGTAA	1430	68.35794	5