SRR3128369.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128369.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1802571
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22521	1.2493821325207162	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3426	0.19006186164095615	No Hit
CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	3210	0.1780789771942409	No Hit
CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	3145	0.17447301659684972	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	3077	0.17070062704880973	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGCAGACT	2841	0.15760821626443564	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2336	0.1295926762385504	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2000	0.11095263376588217	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7540	84.53768	1
ATAGCGG	340	76.09676	1
CGTAGGG	555	74.51613	2
TAGGGCA	975	73.2655	4
AGTAGGG	3140	70.49394	2
AGGGATG	2565	70.17332	5
TAGGGTA	640	69.759636	4
ATAGGGC	980	69.53484	3
AGGGATC	1395	69.062164	5
GGATAGG	1040	68.75316	1
TAAGGGA	1335	68.64579	3
AGGGCAT	1625	68.2526	5
AGATAGG	915	67.86334	1
CCGTACA	1290	67.76162	3
GTAGGGA	1530	67.5759	3
AGTAAGG	955	67.48381	1
GTAGGGC	880	67.28967	3
GGTAAGG	1010	67.06926	1
AAGAGGG	5940	66.45895	2
TATAGGG	1390	66.26769	2