SRR3128365.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128365.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1649400
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24897	1.509457984721717	No Hit
CCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTG	5648	0.34242754941190734	No Hit
GCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTG	4960	0.30071541166484783	No Hit
CTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC	4945	0.29980599005699043	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCAGCAAGCG	4429	0.26852188674669575	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3554	0.21547229295501397	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2088	0.12659148781375046	No Hit
AGAGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTT	1767	0.10712986540560203	No Hit
AGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCT	1703	0.10324966654541046	No Hit
CGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCT	1677	0.10167333575845762	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7970	86.08465	1
CGTAGGG	335	84.18556	2
TAGGGTA	615	74.90006	4
GAATAGG	830	74.22017	1
AGTAGGG	2660	72.27246	2
AGGGCAT	1480	71.7736	5
AGGGTAC	820	71.649666	5
TAGGGCA	845	71.20074	4
TAGTAGG	785	70.687256	1
ACGGGTA	160	70.50541	4
ATAGGGA	1210	70.31118	3
TATAGGG	1170	69.9028	2
ATAGGGC	815	69.7845	3
GTAGGGA	1010	69.34196	3
AGAGGGC	2100	69.16245	3
ATAGAGG	980	68.6181	1
AAGGGTA	1055	68.6119	4
TAAGGGA	1355	67.990456	3
AGGGTAT	925	67.58151	5
ATGAGGG	1830	67.551636	2