SRR3128364.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128364.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1398450
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21935	1.5685222925381672	No Hit
CCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTG	4758	0.3402338303121313	No Hit
CTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC	4290	0.306768207658479	No Hit
GCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTG	4205	0.30069004969787977	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3090	0.22095891880296042	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCAGCAAGCG	2164	0.15474275090278522	No Hit
CGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCT	1536	0.10983588973506382	No Hit
AGAGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTT	1475	0.10547391755157495	No Hit
AGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCT	1447	0.10347170081161286	No Hit
AAAGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTT	1411	0.10089742214594731	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGGGTA	100	89.414894	4
CGTTTTT	7165	86.58622	1
TAGGGTA	585	75.61853	4
TAAGGGA	1270	75.5932	3
AGTACGG	150	75.31293	1
ATGCGGG	610	74.06238	2
CGTAGGG	320	73.53198	2
AGTAAGG	665	72.90631	1
ACGGGAT	360	71.89794	4
AGGGTAC	755	71.59436	5
AGAGGGC	1525	71.593636	3
AGTAGGG	2190	71.34281	2
AGGGCAT	1125	71.027145	5
AGGGTAT	755	70.9718	5
TAGGGCA	745	70.74863	4
ATAGAGG	885	70.20697	1
AAGGGTA	805	70.15225	4
ATGAGGG	1805	70.134445	2
GTAGGGC	545	69.943085	3
AGGGAAT	1430	69.354454	5