SRR3128363.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128363.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1447612
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16988	1.1735188710787146	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGCGTCTAA	7503	0.5183018654169763	No Hit
CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG	3869	0.26726774854035473	No Hit
CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC	3845	0.2656098457321437	No Hit
GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG	3352	0.2315537588801419	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3206	0.22146818346352476	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATG	1961	0.13546447528757705	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1756	0.12130322213410775	No Hit
ATCCGTACACCCACACCTGTCTCTTATACACATCTGACGCGCGTCTAATC	1546	0.10679657256226116	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6175	87.55286	1
CCGTACA	2805	77.240486	3
TCCGTAC	2940	77.21057	2
CGTACAC	2790	77.150406	4
ATCCGTA	2980	76.42164	1
CGTAGGG	445	74.98515	2
GTAGGGC	615	74.12651	3
TAGGGCG	250	73.31647	4
AGGGTAC	675	71.715065	5
TAGGGTA	480	71.47572	4
GTAGGGT	665	70.673294	3
ACGGGTA	120	70.496605	4
TATAGGG	1025	69.694214	2
GTACACC	3070	69.654625	5
AGTAGGG	2165	69.03132	2
AAGGGTA	940	68.99667	4
TAGGGCA	820	68.777176	4
AGAGGGC	1840	68.70865	3
AAGGGCG	580	68.06569	4
AGGGATG	1880	67.746735	5