SRR3128356.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128356.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1488515
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21821	1.465957682656876	No Hit
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	6515	0.4376845379455363	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGACACAAA	6015	0.4040940131607676	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	5901	0.39643537350984037	No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	4782	0.32125977904152797	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2903	0.19502658690036714	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1989	0.13362310759380994	No Hit
CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	1987	0.13348874549467088	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCGACACAAATCGTATG	1790	0.12025407872947198	No Hit
ACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	1538	0.10332445423794855	No Hit
AGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	1495	0.10043566910645846	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7785	88.25963	1
AGGGATG	2055	78.44948	5
GTAGGGA	950	74.214714	3
AGTAGGG	1810	72.71129	2
CGAAGGG	1260	72.36917	2
ATAGCGG	275	71.82689	1
ATAGGGA	1325	71.656876	3
TAGCGGG	680	71.1952	2
AAGGGTA	895	70.89786	4
CGTAGGG	425	70.78047	2
AAGGGAT	2370	70.00818	4
GAGGGAT	1745	69.76325	4
GAATAGG	755	69.14272	1
CCGTACA	2695	69.065125	3
AGGGCAT	1090	68.99241	5
GTAAAGG	955	68.45134	1
ACGGGTA	110	68.3675	4
ATGCGGG	730	68.25043	2
AGGGTAT	905	68.034706	5
TAGAGGG	2465	67.69145	2