SRR3128355.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128355.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1285807
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18516	1.4400294912066898	No Hit
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	5002	0.389016392040174	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	4793	0.3727620086062683	No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	3840	0.29864513103443985	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGACACAAA	3068	0.238605016149391	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1749	0.13602352452584254	No Hit
CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT	1744	0.13563466367814142	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1560	0.1213245844827412	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7040	86.92495	1
GGTAAGG	815	75.66368	1
CGAAGGG	1280	75.00247	2
AGGGATG	2030	73.38835	5
GAATAGG	715	71.76195	1
AGTAGGG	1830	71.23347	2
AAGGGAT	2175	70.32011	4
AGATAGG	610	70.22396	1
AAGGGCA	1835	70.013535	4
ACGGGTC	155	69.83153	4
ACGGGTA	155	69.83153	4
CGTAGGG	405	69.71908	2
ATAGGGA	1150	69.567505	3
TAGGGCG	150	69.02189	4
TAGGGAT	1045	68.901794	4
AGGGATA	1425	68.26835	5
AAGGGTA	925	68.17395	4
GTACGGG	215	67.85449	2
CGAGGGA	695	67.71277	3
AGGGCAT	965	67.69419	5