SRR3128345.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128345.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2057836
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25612	1.2446084138872098	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCAGGGAAGC	4706	0.22868683413061097	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3454	0.16784622292544207	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3409	0.16565945974314766	No Hit
GCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTCTTCTG	3359	0.16322972287393164	Illumina PCR Primer Index 8 (95% over 22bp)
CCTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTCTTCTG	3336	0.16211204391409229	Illumina PCR Primer Index 8 (95% over 22bp)
CTGTCTCTTATACACATCTGACGCAGGGAAGCTCGTATGCCGTCTTCTGC	3143	0.15273325959891848	Illumina PCR Primer Index 8 (95% over 23bp)
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2651	0.12882464880583291	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8080	84.246506	1
TAGGGTA	760	72.3475	4
GAGGGAT	2490	72.28542	4
AGGGTAC	1225	72.12288	5
CCGTACA	2020	71.19038	3
AGGGATG	2930	70.89342	5
AGTAGGG	3480	70.76252	2
TAGGGCA	1175	69.99249	4
GAATAGG	985	69.72866	1
ACGGGAT	635	69.567345	4
CGTAGGG	630	69.37351	2
AGGGCAT	1995	69.25573	5
ATAGCGG	430	68.923416	1
ATAGGGA	1705	68.90756	3
AGACGGG	1380	68.44917	2
TCCGTAC	2180	68.33671	2
ATAAGGG	3220	68.30323	2
GGTAAGG	1260	67.95095	1
TACGGGT	140	67.13565	3
ACGGGTA	280	67.13565	4