SRR3128337.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128337.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1980128
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31159	1.5735851419706202	No Hit
CTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGC	10139	0.5120376056497358	No Hit
CCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTG	8291	0.41871030559640593	No Hit
GCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTG	7717	0.38972228057984126	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTAGGAAT	5082	0.25665007514665716	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3482	0.17584721795762698	No Hit
CGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT	3126	0.15786858223306777	No Hit
AGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT	2610	0.13180966078960552	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2604	0.13150665007514664	No Hit
AGAGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTT	2428	0.12261833578435333	No Hit
GGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT	2314	0.11686113220963493	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTT	2249	0.11357851613633058	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2216	0.11191195720680683	No Hit
GGAGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTT	1997	0.10085206612905832	No Hit
ACCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT	1993	0.10065005898608574	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	10870	87.88612	1
TAGGGCG	280	75.61909	4
AGTAAGG	1040	75.115326	1
TAGGGCA	885	74.43235	4
TAGGGTA	780	74.19719	4
ATAGCGG	305	74.06196	1
AGGGATG	2600	72.67228	5
TAGCGGG	895	72.54926	2
AGGGCAT	1495	72.31072	5
GGTAAGG	1030	72.18944	1
GTAGGGC	820	71.72542	3
GTAGGGT	685	71.436424	3
ATAGAGG	1200	70.19814	1
CGTAGGG	615	69.621475	2
ATAGGGA	1545	69.435776	3
TATAGGG	1305	69.225746	2
AGTAGGG	2495	68.64482	2
GAATAGG	990	68.45121	1
AAGGGTA	1225	68.369255	4
TGTAGGG	1260	68.33725	2