SRR3128332.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128332.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1279118
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18813	1.4707790837123706	No Hit
CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	5228	0.40871913302760177	No Hit
CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC	4792	0.37463314565192574	No Hit
GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	4237	0.3312438727310537	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTCCAGGT	4163	0.32545863634160416	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3353	0.26213375153816926	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1689	0.13204411164568086	No Hit
CGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1593	0.12453894011342191	No Hit
AGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1502	0.11742466293180144	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATG	1329	0.1038997183997098	No Hit
AGAGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTT	1296	0.10131981568549579	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6950	87.2834	1
TAGGGTA	430	81.97187	4
TAGGGCA	615	77.182396	4
CGTAGGG	355	76.784164	2
GTAGGGC	570	76.67965	3
AGTAAGG	755	74.11853	1
GAGGGAT	1280	73.80029	4
TAAACGG	230	73.604004	1
AGTAGGG	1825	73.39289	2
GGTAAGG	760	73.01215	1
AGGGATG	1540	72.93722	5
AGGGCAT	840	72.17428	5
GTAGGGT	530	71.82591	3
AGGGTAC	695	71.67919	5
ATGCGGG	595	71.08821	2
TAAGGGA	1260	70.868805	3
GATTAGG	380	70.53717	1
AGGGTAA	460	70.49581	5
CGAAGGG	1085	70.170944	2
ATAGGGC	705	69.99584	3