SRR3128331.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128331.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1101318
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16197	1.4706923885744172	No Hit
CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	4372	0.3969788925632742	No Hit
CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC	4012	0.3642907861307997	No Hit
GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	3456	0.3138058217517556	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2995	0.27194688545905904	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTCCAGGT	2166	0.19667344036872186	No Hit
CGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1474	0.1338396357818541	No Hit
AGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1309	0.11885758700030329	No Hit
GGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1117	0.10142393023631685	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5695	86.02868	1
GTAGGGC	415	78.225624	3
TAGGGCA	545	76.831894	4
TAGGGTA	395	76.23088	4
ATAGGGC	630	74.68055	3
ATAGGGA	985	74.51375	3
AGTAGGG	1560	73.2908	2
AGGGAAT	950	73.217125	5
GTACGGG	240	72.53678	2
TAGGGTC	390	72.38268	4
GTAGGGT	520	71.4779	3
GAATAGG	510	71.05699	1
AGGGTAA	520	70.496216	5
TATAGGG	765	69.5	2
ATGAGGG	1740	69.4947	2
TAGCGGG	420	69.45607	2
GGTAAGG	625	69.277794	1
AATGCGG	170	69.21136	1
TAGAGGG	1780	68.99034	2
AGGGCAT	890	68.64801	5