SRR3128327.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128327.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1991058
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27048	1.3584737360739867	No Hit
CTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC	3457	0.17362628311179282	No Hit
CCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTG	3319	0.16669529466243574	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGTACTCGG	3083	0.15484229992295553	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2983	0.14981984452487068	No Hit
GCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTG	2922	0.14675614673203893	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2761	0.13866999354112236	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2128	0.10687785087124532	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8320	84.763466	1
CCGTACA	1495	72.615944	3
GGTAAGG	1340	70.92136	1
TCCGTAC	1595	70.715034	2
AGGGATG	2775	70.113	5
TAGGGCA	1040	69.59028	4
GTAGGGC	805	68.888596	3
AGTAGGG	3380	68.54746	2
ATAGGGC	1040	68.23462	3
ATCCGTA	1700	66.97255	1
ATAGCGG	390	66.3481	1
AAGAGGG	6895	66.1148	2
CGTACAC	1640	65.909065	4
GTAGGGA	1250	65.79444	3
AGATAGG	1140	65.61795	1
GAATAGG	1255	65.60316	1
TAGGGAT	1240	65.56704	4
GCATAGG	510	65.496574	1
TAAGGGA	1760	65.15359	3
AGGGCAT	1645	64.56598	5