SRR3128324.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128324.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2045529
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24935	1.219000072841793	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCACTTCCG	4239	0.20723245673857474	No Hit
GCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG	4091	0.1999971645476549	No Hit
CTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC	4075	0.1992149707972852	No Hit
CCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG	4022	0.19662395399918553	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4018	0.19642840556159313	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3010	0.14715019928830145	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2802	0.13698168053349524	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7980	86.25667	1
TCCGTAC	2155	75.02127	2
CCGTACA	2140	73.570595	3
GAATAGG	1265	72.154335	1
AGTAGGG	3170	72.0527	2
TAGGGCA	940	71.99592	4
CGTAGGG	405	71.94654	2
ATCCGTA	2295	70.932396	1
CGTACAC	2205	70.549286	4
GGTAAGG	1215	70.47682	1
TAGGGTA	605	69.91339	4
ACGGGAT	710	69.503105	4
AGGGATG	2635	69.38126	5
ATAGAGG	1415	69.16049	1
AGACGGG	1325	68.811195	2
GAGGGTA	1090	68.55575	4
AGTAAGG	1315	68.337456	1
TAAGGGA	1795	68.33596	3
GTAGGGC	850	67.455	3
AGAGGGC	2625	67.31809	3