SRR3128312.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128312.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2488365
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31198	1.2537549756567063	No Hit
CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC	5867	0.23577730758952165	No Hit
CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG	5499	0.22098848038772448	No Hit
GCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG	4739	0.19044633725357815	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	4147	0.16665561523329578	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTAAGTCCT	4018	0.16147148830657881	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3677	0.14776771092665264	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2796	0.11236293710930673	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	9545	84.37478	1
CGTAGGG	610	75.50261	2
TCCGTAC	2365	75.11495	2
CCGTACA	2320	74.54621	3
TAGGGTA	915	73.96175	4
ATAGCGG	510	73.79121	1
AGTAGGG	3945	72.54976	2
GTAGGGT	1090	72.43501	3
ATCCGTA	2470	72.37215	1
CGTACAC	2390	71.969574	4
TAGGGCA	1280	71.96343	4
AGGGATG	3560	71.68291	5
GGTAAGG	1395	70.47854	1
AGGGCAT	2150	69.94831	5
AAGGGAT	3995	69.75954	4
AGGGTAC	1110	69.43631	5
AAGAGGG	8440	69.26976	2
ATAGGGA	2065	68.95858	3
GTAGGGC	910	68.687225	3
ATGTAGG	815	68.10974	1