SRR3128294.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128294.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1622657
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23173	1.4280898550956858	No Hit
CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC	4984	0.30715055615573716	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCGTCGCAT	4709	0.29020304352675885	No Hit
CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	4070	0.25082318690887845	No Hit
GCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	3253	0.2004736675711503	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2773	0.17089255461875183	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2554	0.15739617183422006	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2215	0.13650451081158865	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7350	86.41376	1
AGGGATG	2185	76.56901	5
TAGGGCA	855	75.302414	4
TAGCGGG	825	73.48356	2
CGTAGGG	340	73.25738	2
ATAAGGG	2275	72.71361	2
ATAGGGA	1055	72.60886	3
AGTAGGG	2535	72.485855	2
CGGGTAT	130	72.30046	5
GTAGGGA	1230	71.830215	3
GAGGGAT	2140	71.81058	4
TCCGTAC	2105	70.995285	2
CCGTACA	2055	70.66447	3
GTAGGGC	705	70.6596	3
TAGGGCG	200	70.49295	4
AGAGGGC	2230	69.755356	3
CGTACAC	2100	69.15022	4
GGTAAGG	900	69.00298	1
ATAGCGG	355	68.914635	1
AGGGAAT	1740	68.60234	5