SRR3128293.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128293.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1827209
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27833	1.523252129340431	No Hit
CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC	4909	0.26866111101685686	No Hit
CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	4424	0.24211789674853834	No Hit
GCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	3572	0.1954894048792448	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3144	0.17206570239091423	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCGTCGCAT	2763	0.15121422891415268	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2487	0.13610922450578997	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1907	0.10436682393749155	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8805	85.60496	1
TAGCGGG	970	77.52485	2
GAATAGG	1015	74.12227	1
TAGGGCA	1095	72.53794	4
GTACGGG	370	72.40454	2
TAAGGGA	1630	72.37337	3
GTAGGGA	1355	71.79988	3
AGGGATG	2775	70.62618	5
GGTAAGG	940	70.53197	1
AGTAGGG	2775	70.287445	2
AGGGTAC	640	69.76479	5
AAGGGTA	1195	69.61423	4
AAGGGAT	3170	69.535446	4
CGAAGGG	1805	69.001945	2
ATAGGGA	1595	68.95215	3
GAGGGAT	2285	68.90508	4
CGTAGGG	475	68.272865	2
AGTAAGG	1180	68.14105	1
AGGGCAT	1795	68.07718	5
AGAGGGC	2535	68.04258	3