SRR3128276.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128276.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1909583
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25033	1.3109144771397736	No Hit
CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	6097	0.31928436731998555	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTACATCA	5940	0.31106267703472434	No Hit
CTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC	5846	0.30614013635437687	No Hit
GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	5646	0.2956666455451269	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3692	0.1933406403387546	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3686	0.19302643561447708	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2158	0.11300896583180725	No Hit
AGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT	1953	0.10227363775232602	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCCTACATCATCGTATG	1939	0.10154049339567853	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8125	86.61353	1
CCGTACA	2735	79.733345	3
TCCGTAC	2850	78.329994	2
CGTACAC	2830	76.89071	4
ATCCGTA	2940	76.481804	1
TAGGGCG	310	74.28716	4
CGTAGGG	485	72.67731	2
TAGGGCA	740	72.40232	4
CGGGTAT	85	71.879295	5
CGAAGGG	1660	70.496994	2
AGGGAAT	1650	70.354576	5
TAAGGGA	1595	70.12867	3
ACGGGAT	490	70.017426	4
AGGGCAT	1700	69.94408	5
AGTAAGG	1105	69.81666	1
ATAGCGG	270	69.69053	1
GGTAAGG	1050	69.441635	1
GAATAGG	910	69.269325	1
GTACACC	3130	68.92039	5
ATAGAGG	1140	68.49845	1