SRR3128275.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128275.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2119070
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30169	1.4236905812455463	No Hit
CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	6987	0.3297201130684687	No Hit
CTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC	6617	0.31225962332532664	No Hit
GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG	6166	0.29097670204382114	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	4075	0.19230133973865896	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCTACATCA	3546	0.16733755845724776	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2524	0.1191088543559203	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2450	0.11561675640729188	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	9575	86.07328	1
TAGGGTC	550	74.344444	4
TAGGGCA	1035	73.564224	4
ATAGGGA	1815	73.28275	3
TAAGGGA	1690	72.02861	3
AGTAGGG	3335	71.59124	2
TAGGGAC	1060	70.94243	4
AGGGCAT	1850	70.624405	5
AGGGAAT	1960	70.25759	5
TAGGGTA	745	70.0259	4
CGTAGGG	470	69.99905	2
GGTAAGG	1215	69.65005	1
GTAGGGC	725	69.36458	3
AGGGATG	2595	69.18433	5
AGGGTAC	775	68.52649	5
ATAACGG	145	68.08893	1
GTAGGGT	795	67.986496	3
ATAAGGG	2590	67.68634	2
TATAGGG	1855	67.39531	2
GAGGGAT	2595	67.01258	4