SRR3128258.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128258.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1716812
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21056	1.2264592745157887	No Hit
CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC	5231	0.3046926512629222	No Hit
CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	5176	0.301489038986214	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCACACAACT	5108	0.29752820926228385	No Hit
GCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	5012	0.2919364496520295	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3712	0.21621470492983508	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2966	0.1727620729584835	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2558	0.1489970946149025	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6995	86.3657	1
TAGCGGG	770	79.951324	2
CGTAGGG	615	77.17762	2
CCGTACA	2435	75.075066	3
TCCGTAC	2565	74.93437	2
AGGGCAT	1430	74.59933	5
ATAGCGG	405	73.18963	1
ATCCGTA	2625	72.59216	1
GTAGGGC	810	72.52206	3
CGTACAC	2510	72.45733	4
ATAGGGA	1540	71.71207	3
AGTAGGG	2595	71.35164	2
GGTAAGG	1080	71.01136	1
CTACGAC	675	70.31738	5
TAAGGGA	1515	70.1037	3
AGGGATG	2635	69.91181	5
GTAGGGA	1480	69.53885	3
ATAAGGG	2120	69.38308	2
GACCGAT	95	69.254745	8
TAGGGTA	565	69.03586	4