SRR3128257.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128257.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1895891
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25735	1.3574092603424988	No Hit
CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC	5987	0.315788196684303	No Hit
CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	5942	0.3134146425084564	No Hit
GCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	5289	0.27897173413450455	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3312	0.1746935873423103	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCACACAACT	2971	0.1567073212542282	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2888	0.15232943244100003	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2477	0.1306509709682677	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8480	86.83635	1
TAGCGGG	865	82.58772	2
ATAGCGG	320	76.41155	1
GGTAAGG	1050	74.340324	1
TAGGGCG	280	73.85546	4
AGGGCAT	1655	72.131294	5
CTAGCGG	335	71.58649	1
ACGGGTA	270	71.36875	4
AGGGATG	3000	70.96838	5
TAAGGGA	1615	70.71666	3
CGTAGGG	730	70.17648	2
AAGGGAT	3435	69.9169	4
AGGGATC	1890	69.87672	5
TAGGGTC	555	69.439865	4
ATAGGGA	1875	69.43309	3
TAGGGCA	1105	69.32874	4
AGGGAAT	1935	69.223236	5
CCGTACA	1650	68.93176	3
GTACGGG	375	68.93176	2
TATAGGG	1445	68.6282	2