SRR3128252.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128252.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2437280
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36871	1.512792949517495	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	3967	0.1627634083896803	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	3777	0.15496783299415742	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3419	0.14027932777522484	No Hit
GCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	3196	0.1311297840215322	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGATACGT	3072	0.12604214534234884	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2869	0.11771318847239545	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2555	0.10482997439768922	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	11350	84.62484	1
TAGGGCA	1280	77.47181	4
ATAGGGC	1485	73.4231	3
CGTACAC	1600	71.37688	4
AGGGATG	3485	70.7991	5
CCGTACA	1635	70.71126	3
AGGGTAC	1000	70.49568	5
AGATAGG	1440	70.26301	1
AGTAAGG	1530	70.12843	1
TCCGTAC	1690	70.078545	2
GATAGGG	3495	69.78971	2
ATAGGGA	2090	69.48378	3
GTAGGGA	1665	69.154915	3
GAATAGG	1430	69.1089	1
GAGGGAT	2935	69.01451	4
GAGGGTA	1305	68.78505	4
AGGGAAT	2145	68.35945	5
AGTAGGG	4150	68.06088	2
CGTAGGG	715	67.70215	2
ATCCGTA	1770	67.53224	1