SRR3128243.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128243.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2023832
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35047	1.7317148854252724	No Hit
CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC	4045	0.19986836852070727	No Hit
CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	3897	0.19255550855999903	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2999	0.14818423663624253	No Hit
GCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	2774	0.13706671304732804	No Hit
CGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCT	2560	0.1264927128338716	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2518	0.12441744176394087	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCACGGTGT	2332	0.1152269555971049	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	11545	87.191696	1
AGGGTAC	1625	78.08496	5
TAGGGTA	895	76.66318	4
GAGGGAT	2415	74.1421	4
AGATAGG	1125	72.36888	1
AAGGGTA	1965	71.74898	4
ATAGGGC	1200	71.66825	3
GAATAGG	1220	70.976776	1
ATAGGGA	1810	70.882835	3
ACGGGTA	325	70.854866	4
TAGGGCA	940	70.49337	4
AAGGGAT	3420	70.49337	4
AGGGATC	2060	69.80896	5
AGTAGGG	3595	69.80706	2
AGTAAGG	1285	69.5839	1
TAAGGGA	1920	69.51429	3
GGTAAGG	1125	69.44066	1
TCCGTAC	1565	69.36727	2
CGTAGGG	590	69.29856	2
GTAGGGA	1500	69.24015	3