SRR3128240.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128240.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2627026
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	39640	1.5089306310634154	No Hit
CTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGC	5499	0.2093241559086206	No Hit
CCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTG	4896	0.18637044323124324	TruSeq Adapter, Index 22 (95% over 21bp)
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCGGAGTTA	4411	0.16790850185723324	No Hit
GCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTG	4344	0.16535808933752463	TruSeq Adapter, Index 22 (95% over 21bp)
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	4125	0.1570216663253428	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3318	0.1263025185133303	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3131	0.11918420297324808	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	12620	86.80401	1
CCGTACA	2145	75.588165	3
TCCGTAC	2210	74.64089	2
CGTAGGG	605	73.01876	2
AGGGATG	3940	72.87977	5
TAGCGGG	1230	72.59563	2
TAGGGCA	1495	71.67301	4
ATCCGTA	2335	71.339905	1
GAATAGG	1615	70.80271	1
CGTACAC	2290	69.981125	4
GGTAAGG	1375	69.81418	1
AAGGGTA	1810	69.58542	4
AGGGCAT	2385	69.361145	5
ATAGGGC	1620	69.33378	3
AGTAGGG	3945	69.33267	2
ATAGGGA	2565	69.25744	3
AGGGTAC	1225	69.05552	5
ATAGCGG	510	68.27752	1
GAGGGAT	3120	67.93349	4
GTAGGGC	1145	67.72366	3