SRR3128231.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128231.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2646395
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37599	1.4207629624451377	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4848	0.1831926073016311	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	4170	0.15757284910226932	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3980	0.150393270845811	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	3714	0.14034186128676937	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGCTGAGGT	3689	0.13939717993723535	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3277	0.12382883129691524	No Hit
GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	3217	0.12156159605803366	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	11875	86.211464	1
TCCGTAC	1895	72.66485	2
CCGTACA	1880	72.49468	3
AGGGATG	4080	72.45302	5
AGATAGG	1350	72.173195	1
TAGGGCA	1225	72.12532	4
ATAGGGC	1375	71.77656	3
ATAGGGA	2220	70.49483	3
CGTACAC	1935	70.19123	4
ATCCGTA	1985	70.18925	1
GAGGGAT	3420	69.94516	4
AGTAGGG	4550	69.82345	2
GGTAAGG	1645	69.81734	1
CGTAGGG	875	69.28635	2
GAATAGG	1665	68.97869	1
ATAGAGG	1915	68.82221	1
TAGGGTA	905	68.54746	4
TAAGGGA	2050	67.85844	3
AGTACGG	285	67.71399	1
AGAGGGC	3795	66.748726	3