SRR3128228.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128228.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2195928
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35721	1.6266926784484739	No Hit
CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC	3086	0.14053284078530806	No Hit
CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	3036	0.13825589910051694	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2967	0.1351137195755052	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2926	0.13324662739397647	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2411	0.10979412804062792	No Hit
CGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCT	2390	0.10883781253301565	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTGGACTGG	2347	0.10687964268409529	No Hit
GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	2200	0.1001854341308094	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	11080	85.027756	1
GGTAAGG	1550	74.07891	1
ATAGGGC	1315	73.98045	3
TAGGGCA	1090	73.298454	4
GAGGGAT	2715	72.18362	4
TAGACGG	295	71.783875	1
TAGGGTA	615	71.06901	4
AGGGATG	3385	70.2529	5
CCGTACA	1285	69.85583	3
ATAGGGA	1875	69.681244	3
AGGGAAT	2000	68.381	5
TCCGTAC	1355	68.3281	2
AGTAGGG	3620	68.28882	2
AGTAAGG	1270	67.80845	1
AGGGCAT	2135	67.57918	5
CGTACAC	1330	67.138916	4
AGATAGG	1320	67.02246	1
ATAGAGG	1605	66.849205	1
GTAGGGT	855	66.51072	3
AGGGATC	1710	66.51072	5