SRR3128216.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128216.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2194871
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28129	1.2815787351511776	No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	5315	0.24215546152826292	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	5311	0.2419732184716095	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTTGGTACA	5113	0.23295218716726404	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	4411	0.20096853072458476	No Hit
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	4225	0.1924942285901996	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2981	0.1358166379709787	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2615	0.11914139828718864	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	9035	86.0914	1
CGTAGGG	775	80.04476	2
TAGGGCA	1005	75.75471	4
CCGTACA	2465	75.30796	3
GGTAAGG	1320	75.218315	1
TCCGTAC	2575	75.193565	2
AGTACGG	245	72.984825	1
CGTACAC	2555	72.4713	4
AGATAGG	1150	72.42534	1
ATAGGGC	1350	72.40862	3
AGGGATG	3180	71.82404	5
ATCCGTA	2700	71.803986	1
GAATAGG	1170	71.589485	1
AGGGCAT	2075	70.43735	5
GAGGGAT	2655	70.272705	4
ATAGGGA	1785	69.50666	3
AGTAGGG	3595	69.15402	2
AGGGTAC	1000	69.08408	5
AAGGGAT	3710	68.657196	4
ATAAGGG	2670	68.64581	2