SRR3128215.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128215.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2425369
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33857	1.3959525334083185	No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	5969	0.24610688105603726	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	5920	0.2440865699198761	No Hit
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	4606	0.18990924679914686	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3502	0.14439039997625103	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3057	0.12604267639274686	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2999	0.12365128770096426	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTTGGTACA	2980	0.12286790175020791	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	10440	86.34261	1
CGTAGGG	830	77.58306	2
TAGGGCA	1155	75.69138	4
ATAGGGA	2120	72.0563	3
AGGGCAT	2405	71.91976	5
TAGGGTA	765	71.88527	4
GTAGGGT	965	71.60024	3
AGTAGGG	3855	71.083466	2
ATAGGGC	1495	69.79691	3
GGTAAGG	1410	69.69967	1
AGGGATG	3535	69.53889	5
TAAGGGA	2115	68.893105	3
AGTAAGG	1730	68.76666	1
AGAGGGC	3290	68.289894	3
CGAAGGG	2330	68.18443	2
ATAAGGG	3075	67.56186	2
TAGAGGG	4420	67.42042	2
TGTAGGG	1770	67.184906	2
AAGGGAT	4180	67.12952	4
GAATAGG	1215	66.953514	1