SRR3128210.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128210.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2164944
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29398	1.3579104124633246	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTCGGGTGA	4257	0.1966332616455668	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3951	0.1824989468549764	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3910	0.1806051334353221	No Hit
CCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG	3642	0.16822606035075272	No Hit
CTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC	3524	0.16277557294784528	No Hit
GCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG	3031	0.14000362134078295	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2304	0.10642307607032792	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	9480	86.36395	1
ATAGGGC	1525	78.276886	3
AGGGATG	3330	74.941086	5
CCGTACA	2240	74.9014	3
TCCGTAC	2335	74.47054	2
GTAGGGA	1610	74.436165	3
TAGGGCA	1170	73.90974	4
AGTAAGG	1305	72.11258	1
CGTACAC	2315	72.06876	4
AGGGAAT	2080	71.85111	5
AGGGTAC	840	71.6144	5
GAATAGG	1270	71.13595	1
TAAGGGA	1745	70.83208	3
GAGGGAT	2860	70.82408	4
AGTAGGG	3420	70.63284	2
ATCCGTA	2495	69.590096	1
AAGGGAT	3720	69.358406	4
ACGGGTA	190	69.25867	4
TAGGGTA	530	69.16532	4
AGATAGG	1220	69.03746	1